Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924694.1_cds_XP_016472990.1_65166
CDS Infomation

[gene=LOC107794943] [db_xref=GeneID:107794943] [protein=putative F-box/FBD/LRR-repeat protein At4g03220] [protein_id=XP_016472990.1] [location=join(8409..9479,10181..10366,10870..11172)] [gbkey=CDS]
Sequence

ATGGAAACAAGATCTGCTAAGAAAATAAGGCTTCTAAATGAAATCTACGAAAGTTTTTCA
TCATGTGGTGAAGATAGGATTAGTGATCTCCCAGATGCAGTTCTTCATCATATTCTTTTT
TCTCTTCCAATTAAATCCATTGCTAAAACTAGTGTCCTTTCTAAACGATGGAGATATCTA
TGGTACACATTCCCAGATCTCGATTTTACCACAATCAACGTCCCATCATCCATTAACTCA
ACCCCAAAAGTCAGCCCAAATAGTCATAAAAAACTACACACTACTTGGAGTAATATTGCA
GGAGGAGCTGATTTCATCGATCAAGTGTTGTCCCTTCGCGAAAAAAATTCAGGGATTAGA
TTCCTCCGTTTTCGTGCAAATTTGAGTTTTTCCCGATTGAATAGCCTGATTCGTGGCGCT
GTTAAGCACAATGTTCAAGAACTAGATGTTGAGGTTGCAACCAATGATTACTTTAATTTC
CCTCGAAGTGCAATTAGTAGTGACTCTTTAAGGGTTTTTAAATTAAAGTCCAAGTATCCA
GGGTTCAGGTTACCTCCTTCTTCAATTATGAAGAATGGTTTCAGAAATTTGTTTTCACTA
TCACTTTCGTGCATTATTATGTACGAGCAACCTTCACTTCATGATTTGTTTACCGATTCA
TCTTTTCCATTGCTTAAAAAGTTGAATCTTGAAAATTGTAGTGGACTAATTTATCTACAT
GTAAGTTGTCGTGTACTTGAAGAATTAACACTTGAGAATTGTTTTCAATTGGAGCATTTA
GATGTAACGGGTCCAAAATTGGAAAGTTTGAGTGTCAAGAGTTGTTTTGATTCGTACACT
AGTGGCACTAAGGTCAAGGTTAATGGTCCAAGACTTAAAAGGATAATATGGTCGAGTAAT
ACTATAACAGACCAGAGTTGTTTGGAGAATTTAACTTCTTTGATTGAGGCGTTGGTTGGG
TTTTTTGTTCTTCTTGAGGACCTTAGCGCAATGAAGCTTCGGAGTGTGAATGATTTCTTG
TCGGGGCTCTCTCATTCCCATTCTTTACTTCTTGAAAACCAAAGCGTTGAGATTCTATCG
AAGAATAATCACTTGGCAGGAATTTCACTGCGGCCTTTTACAAAACTGAGATGCTTAGAG
TTGCACACAGGATTCCGCAAACACAACATTCCAGGATTAGCAAATATATTTAGGAGTTCC
CCAGCTACTAACACACTCATTCTCAAGATTACCAATGACCACAACATCGAAAGAAGGAAA
TGGAACAGGGACCTATGGCAATTGTCCAACTCTGGTGAAGAAAGATTTTGGGAGTCACAA
AGTCATGCCATAAATTCCTTCCTTCAACATCTTAAAGTAGTAAAGATTTATGGATTCTCA
GACTGTGAAAGTGATGTTAGTTTAGTGAAGTTTTTGCTGAAGCATGGGAAAGTGTTGCAA
GAAATGTTCTTGTGTGCAGAGATTTCCAAGTCAAGAGACTCGCTACACAGAGAAAAAATC
AAGTCACAAATAATGGGGTTTTCCAAGGCATCTTGTAACGCTAAGATTGTTTTCAAGTGA

Peptide Sequence

PEP ID

XP_016472990.1
PEP Infomation

PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220 [Nicotiana tabacum]
Sequence

METRSAKKIRLLNEIYESFSSCGEDRISDLPDAVLHHILFSLPIKSIAKTSVLSKRWRYL
WYTFPDLDFTTINVPSSINSTPKVSPNSHKKLHTTWSNIAGGADFIDQVLSLREKNSGIR
FLRFRANLSFSRLNSLIRGAVKHNVQELDVEVATNDYFNFPRSAISSDSLRVFKLKSKYP
GFRLPPSSIMKNGFRNLFSLSLSCIIMYEQPSLHDLFTDSSFPLLKKLNLENCSGLIYLH
VSCRVLEELTLENCFQLEHLDVTGPKLESLSVKSCFDSYTSGTKVKVNGPRLKRIIWSSN
TITDQSCLENLTSLIEALVGFFVLLEDLSAMKLRSVNDFLSGLSHSHSLLLENQSVEILS
KNNHLAGISLRPFTKLRCLELHTGFRKHNIPGLANIFRSSPATNTLILKITNDHNIERRK
WNRDLWQLSNSGEERFWESQSHAINSFLQHLKVVKIYGFSDCESDVSLVKFLLKHGKVLQ
EMFLCAEISKSRDSLHREKIKSQIMGFSKASCNAKIVFK

Transcript Sequence

Gene sequence data has not been registered.